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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs2114869 chr12:9808426 T/C 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs2125876 chr3:53750266 C/G 1.25E-8 66 27.9 27.63 12.33 KM Plot
UVM rs2162657 chr12:9811049 T/G 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs2182967 chr20:30339385 C/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs2307358 chr2:201785657 T/C 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs2307362 chr2:201785837 A/G 2.98E-7 67 1.27 27.9 24.77 KM Plot
UVM rs2359204 chr3:53749740 C/G 1.25E-8 66 27.9 27.63 12.33 KM Plot
UVM rs2412524 chr15:40793261 G/T 0.000317 67 27.23 27.37 16.78 KM Plot
UVM rs28493909 chr7:151121040 A/G 0.00011 67 26.98 24.45 7.6 KM Plot
UVM rs28763881 chr20:30420059 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs3199045 chr12:132621375 A/G 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs34040005 chr2:239021538 G/A 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs34088794 chr15:40665420 G/A 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs34303240 chr15:40870895 T/C 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs34323946 chr12:9760190 C/G 0.00014 66 27.37 21.8 7.6 KM Plot